WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.7.1 Sequence Name  C17G1.7.1
Length (nt)  1236   Chromosome Location  X: 9952579-9954533
Chromosome . Primary Identifier  X Chromosome Location . Start  9952579
Chromosome Location . End  9954533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007653 cysl-1 C17G1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.7 C17G1.7 1026   X: 9952789-9952900

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.7.1 9952579 9954533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247601   322   X: 9952579-9952900 Caenorhabditis elegans
Exon247602   109   X: 9953065-9953173 Caenorhabditis elegans
Exon247603   484   X: 9953242-9953725 Caenorhabditis elegans
Exon247604   129   X: 9953880-9954008 Caenorhabditis elegans
Exon247605   89   X: 9954061-9954149 Caenorhabditis elegans
Exon247606   103   X: 9954431-9954533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.7.1 9952579 9954533 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
transcript