WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC506.3 Sequence Name  ZC506.3
Length (nt)  1524   Chromosome Location  X: 9965599-9965657
Chromosome . Primary Identifier  X Chromosome Location . Start  9965599
Chromosome Location . End  9965657
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01681 PSSY-1 58.7 507 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00058984
WBRNAi00038086
WBRNAi00087512
WBRNAi00001747

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC506.3 9965599 9965657 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013920 pssy-1 ZC506.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC506.3 9965599 9965657 1
CDS:ZC506.3 9965726 9965824 1
CDS:ZC506.3 9965907 9966077 1
CDS:ZC506.3 9966708 9966808 1
CDS:ZC506.3 9966856 9967181 1
CDS:ZC506.3 9967228 9967449 1
CDS:ZC506.3 9967496 9967846 1
CDS:ZC506.3 9968014 9968208 1

1 Sequence

Length
1524

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC506.3.1 ZC506.3.1 1901   X: 9965592-9968578
Transcript:ZC506.3.2 ZC506.3.2 1894   X: 9965599-9968578