WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC506.4a.1 Sequence Name  ZC506.4a.1
Length (nt)  3188   Chromosome Location  X: 9968517-9976017
Chromosome . Primary Identifier  X Chromosome Location . Start  9968517
Chromosome Location . End  9976017 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003232 mgl-1 ZC506.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC506.4a ZC506.4a 2850   X: 9968629-9968788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4a.1 9968517 9976017 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247636   272   X: 9968517-9968788 Caenorhabditis elegans
Exon247640   146   X: 9969191-9969336 Caenorhabditis elegans
Exon247644   248   X: 9969386-9969633 Caenorhabditis elegans
Exon247648   73   X: 9969676-9969748 Caenorhabditis elegans
Exon247652   259   X: 9969791-9970049 Caenorhabditis elegans
Exon247656   239   X: 9970339-9970577 Caenorhabditis elegans
Exon247660   102   X: 9970619-9970720 Caenorhabditis elegans
Exon247665   164   X: 9970778-9970941 Caenorhabditis elegans
Exon247669   148   X: 9970990-9971137 Caenorhabditis elegans
Exon247673   97   X: 9971183-9971279 Caenorhabditis elegans
Exon247678   372   X: 9971651-9972022 Caenorhabditis elegans
Exon247682   115   X: 9972101-9972215 Caenorhabditis elegans
Exon247686   110   X: 9972331-9972440 Caenorhabditis elegans
Exon247690   189   X: 9972486-9972674 Caenorhabditis elegans
Exon247694   110   X: 9972797-9972906 Caenorhabditis elegans
Exon247699   82   X: 9972951-9973032 Caenorhabditis elegans
Exon247702   107   X: 9973090-9973196 Caenorhabditis elegans
Exon247705   36   X: 9973799-9973834 Caenorhabditis elegans
Exon247709   84   X: 9973922-9974005 Caenorhabditis elegans
Exon247711   235   X: 9975783-9976017 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4a.1 9968517 9976017 -1

1 Sequence

Length
3188

1 Sequence Ontology Term

Identifier Name Description
transcript