WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC506.4b.1 Sequence Name  ZC506.4b.1
Length (nt)  2817   Chromosome Location  X: 9968629-9973981
Chromosome . Primary Identifier  X Chromosome Location . Start  9968629
Chromosome Location . End  9973981 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003232 mgl-1 ZC506.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC506.4b ZC506.4b 2817   X: 9968629-9968788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4b.1 9968629 9973981 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247638   160   X: 9968629-9968788 Caenorhabditis elegans
Exon247641   146   X: 9969191-9969336 Caenorhabditis elegans
Exon247645   248   X: 9969386-9969633 Caenorhabditis elegans
Exon247649   73   X: 9969676-9969748 Caenorhabditis elegans
Exon247653   259   X: 9969791-9970049 Caenorhabditis elegans
Exon247657   239   X: 9970339-9970577 Caenorhabditis elegans
Exon247661   102   X: 9970619-9970720 Caenorhabditis elegans
Exon247666   164   X: 9970778-9970941 Caenorhabditis elegans
Exon247670   148   X: 9970990-9971137 Caenorhabditis elegans
Exon247674   97   X: 9971183-9971279 Caenorhabditis elegans
Exon247679   372   X: 9971651-9972022 Caenorhabditis elegans
Exon247683   115   X: 9972101-9972215 Caenorhabditis elegans
Exon247687   110   X: 9972331-9972440 Caenorhabditis elegans
Exon247691   189   X: 9972486-9972674 Caenorhabditis elegans
Exon247695   110   X: 9972797-9972906 Caenorhabditis elegans
Exon247700   82   X: 9972951-9973032 Caenorhabditis elegans
Exon247703   107   X: 9973090-9973196 Caenorhabditis elegans
Exon247706   36   X: 9973799-9973834 Caenorhabditis elegans
Exon247708   60   X: 9973922-9973981 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4b.1 9968629 9973981 -1

1 Sequence

Length
2817

1 Sequence Ontology Term

Identifier Name Description
transcript