WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC506.4c.1 Sequence Name  ZC506.4c.1
Length (nt)  2859   Chromosome Location  X: 9968629-9976306
Chromosome . Primary Identifier  X Chromosome Location . Start  9968629
Chromosome Location . End  9976306 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003232 mgl-1 ZC506.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC506.4c ZC506.4c 2859   X: 9968629-9968788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4c.1 9968629 9976306 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247639   160   X: 9968629-9968788 Caenorhabditis elegans
Exon247642   146   X: 9969191-9969336 Caenorhabditis elegans
Exon247646   248   X: 9969386-9969633 Caenorhabditis elegans
Exon247650   73   X: 9969676-9969748 Caenorhabditis elegans
Exon247654   259   X: 9969791-9970049 Caenorhabditis elegans
Exon247658   239   X: 9970339-9970577 Caenorhabditis elegans
Exon247662   102   X: 9970619-9970720 Caenorhabditis elegans
Exon247667   164   X: 9970778-9970941 Caenorhabditis elegans
Exon247671   148   X: 9970990-9971137 Caenorhabditis elegans
Exon247675   97   X: 9971183-9971279 Caenorhabditis elegans
Exon247680   372   X: 9971651-9972022 Caenorhabditis elegans
Exon247684   115   X: 9972101-9972215 Caenorhabditis elegans
Exon247688   110   X: 9972331-9972440 Caenorhabditis elegans
Exon247692   189   X: 9972486-9972674 Caenorhabditis elegans
Exon247696   110   X: 9972797-9972906 Caenorhabditis elegans
Exon247701   82   X: 9972951-9973032 Caenorhabditis elegans
Exon247704   107   X: 9973090-9973196 Caenorhabditis elegans
Exon247707   36   X: 9973799-9973834 Caenorhabditis elegans
Exon247710   84   X: 9973922-9974005 Caenorhabditis elegans
Exon247714   18   X: 9976289-9976306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4c.1 9968629 9976306 -1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
transcript