WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03E5.3a.1 Sequence Name  K03E5.3a.1
Length (nt)  2327   Chromosome Location  I: 3410013-3416368
Chromosome . Primary Identifier  I Chromosome Location . Start  3410013
Chromosome Location . End  3416368 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03E5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019362 cdk-2 K03E5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03E5.3a K03E5.3a 1017   I: 3410025-3410046

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03E5.3a.1 3410013 3416368 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6901   34   I: 3410013-3410046 Caenorhabditis elegans
Exon6902   228   I: 3410123-3410350 Caenorhabditis elegans
Exon6904   238   I: 3411396-3411633 Caenorhabditis elegans
Exon6906   67   I: 3413014-3413080 Caenorhabditis elegans
Exon6907   159   I: 3413146-3413304 Caenorhabditis elegans
Exon6909   258   I: 3414715-3414972 Caenorhabditis elegans
Exon6912   1343   I: 3415026-3416368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03E5.3a.1 3410013 3416368 1

1 Sequence

Length
2327

1 Sequence Ontology Term

Identifier Name Description
transcript