WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19C6.3.1 Sequence Name  F19C6.3.1
Length (nt)  1871   Chromosome Location  X: 10005304-10008764
Chromosome . Primary Identifier  X Chromosome Location . Start  10005304
Chromosome Location . End  10008764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19C6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008952 F19C6.3 F19C6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19C6.3 F19C6.3 1290   X: 10005876-10005995

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19C6.3.1 10005304 10008764 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247754   692   X: 10005304-10005995 Caenorhabditis elegans
Exon247755   72   X: 10006547-10006618 Caenorhabditis elegans
Exon247756   172   X: 10006677-10006848 Caenorhabditis elegans
Exon247757   107   X: 10006892-10006998 Caenorhabditis elegans
Exon247758   97   X: 10007069-10007165 Caenorhabditis elegans
Exon247759   71   X: 10007213-10007283 Caenorhabditis elegans
Exon247760   75   X: 10007445-10007519 Caenorhabditis elegans
Exon247761   166   X: 10007788-10007953 Caenorhabditis elegans
Exon247762   197   X: 10007996-10008192 Caenorhabditis elegans
Exon247763   222   X: 10008543-10008764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19C6.3.1 10005304 10008764 -1

1 Sequence

Length
1871

1 Sequence Ontology Term

Identifier Name Description
transcript