WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.8.1 Sequence Name  Y47G6A.8.1
Length (nt)  1317   Chromosome Location  I: 3481997-3484500
Chromosome . Primary Identifier  I Chromosome Location . Start  3481997
Chromosome Location . End  3484500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000794 crn-1 Y47G6A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.8 Y47G6A.8 1149   I: 3482030-3482119

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.8.1 3481997 3484500 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7019   123   I: 3481997-3482119 Caenorhabditis elegans
Exon7020   708   I: 3482464-3483171 Caenorhabditis elegans
Exon7021   152   I: 3483963-3484114 Caenorhabditis elegans
Exon7022   334   I: 3484167-3484500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.8.1 3481997 3484500 1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
transcript