WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC374.2.1 Sequence Name  ZC374.2.1
Length (nt)  2366   Chromosome Location  X: 10034607-10047425
Chromosome . Primary Identifier  X Chromosome Location . Start  10034607
Chromosome Location . End  10047425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC374.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013872 ZC374.2 ZC374.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC374.2 ZC374.2 2025   X: 10034836-10034937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC374.2.1 10034607 10047425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247836   331   X: 10034607-10034937 Caenorhabditis elegans
Exon247837   134   X: 10035178-10035311 Caenorhabditis elegans
Exon247838   127   X: 10035934-10036060 Caenorhabditis elegans
Exon247839   80   X: 10036113-10036192 Caenorhabditis elegans
Exon247840   114   X: 10036393-10036506 Caenorhabditis elegans
Exon247841   166   X: 10037367-10037532 Caenorhabditis elegans
Exon247842   137   X: 10038889-10039025 Caenorhabditis elegans
Exon247843   89   X: 10039477-10039565 Caenorhabditis elegans
Exon247844   100   X: 10040285-10040384 Caenorhabditis elegans
Exon247845   117   X: 10040511-10040627 Caenorhabditis elegans
Exon247846   136   X: 10041894-10042029 Caenorhabditis elegans
Exon247847   68   X: 10042681-10042748 Caenorhabditis elegans
Exon247848   313   X: 10044560-10044872 Caenorhabditis elegans
Exon247849   72   X: 10046328-10046399 Caenorhabditis elegans
Exon247850   128   X: 10046754-10046881 Caenorhabditis elegans
Exon247851   254   X: 10047172-10047425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC374.2.1 10034607 10047425 -1

1 Sequence

Length
2366

1 Sequence Ontology Term

Identifier Name Description
transcript