WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC373.1b.1 Sequence Name  ZC373.1b.1
Length (nt)  2289   Chromosome Location  X: 10054275-10057528
Chromosome . Primary Identifier  X Chromosome Location . Start  10054275
Chromosome Location . End  10057528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC373.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013866 cbs-1 ZC373.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC373.1b ZC373.1b 1134   X: 10054304-10054344

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC373.1b.1 10054275 10057528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247861   70   X: 10054275-10054344 Caenorhabditis elegans
Exon247864   104   X: 10054683-10054786 Caenorhabditis elegans
Exon247866   68   X: 10054931-10054998 Caenorhabditis elegans
Exon247868   104   X: 10055042-10055145 Caenorhabditis elegans
Exon247870   409   X: 10055205-10055613 Caenorhabditis elegans
Exon247872   389   X: 10055692-10056080 Caenorhabditis elegans
Exon247874   102   X: 10056194-10056295 Caenorhabditis elegans
Exon247876   449   X: 10056348-10056796 Caenorhabditis elegans
Exon247878   389   X: 10056889-10057277 Caenorhabditis elegans
Exon247880   205   X: 10057324-10057528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC373.1b.1 10054275 10057528 1

1 Sequence

Length
2289

1 Sequence Ontology Term

Identifier Name Description
transcript