WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC373.1a.1 Sequence Name  ZC373.1a.1
Length (nt)  2284   Chromosome Location  X: 10054281-10057524
Chromosome . Primary Identifier  X Chromosome Location . Start  10054281
Chromosome Location . End  10057524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC373.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013866 cbs-1 ZC373.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC373.1a ZC373.1a 2115   X: 10054304-10054344

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC373.1a.1 10054281 10057524 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247862   64   X: 10054281-10054344 Caenorhabditis elegans
Exon247863   104   X: 10054683-10054786 Caenorhabditis elegans
Exon247865   68   X: 10054931-10054998 Caenorhabditis elegans
Exon247867   104   X: 10055042-10055145 Caenorhabditis elegans
Exon247869   409   X: 10055205-10055613 Caenorhabditis elegans
Exon247871   389   X: 10055692-10056080 Caenorhabditis elegans
Exon247873   107   X: 10056189-10056295 Caenorhabditis elegans
Exon247875   449   X: 10056348-10056796 Caenorhabditis elegans
Exon247877   389   X: 10056889-10057277 Caenorhabditis elegans
Exon247879   201   X: 10057324-10057524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC373.1a.1 10054281 10057524 1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript