WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.20b Sequence Name  Y47G6A.20b
Length (nt)  2250   Chromosome Location  I: 3539647-3540102
Chromosome . Primary Identifier  I Chromosome Location . Start  3539647
Chromosome Location . End  3540102
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.20b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24366 RNP-6, isoform b 81.6 749 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00066063
WBRNAi00056811
WBRNAi00075328
WBRNAi00037188
WBRNAi00083563
WBRNAi00083704
WBRNAi00083793
WBRNAi00004640
WBRNAi00004641
WBRNAi00026729
WBRNAi00083599
WBRNAi00071094
WBRNAi00075329
WBRNAi00026728
WBRNAi00026730
WBRNAi00116867
WBRNAi00083541

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.20b 3539647 3540102 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004389 rnp-6 Y47G6A.20 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.20b 3539647 3540102 -1
CDS:Y47G6A.20b 3541335 3542012 -1
CDS:Y47G6A.20b 3542982 3543116 -1
CDS:Y47G6A.20b 3543583 3543726 -1
CDS:Y47G6A.20b 3544403 3544616 -1
CDS:Y47G6A.20b 3545775 3545977 -1
CDS:Y47G6A.20b 3546364 3546522 -1
CDS:Y47G6A.20b 3546577 3546741 -1
CDS:Y47G6A.20b 3546799 3546894 -1

1 Sequence

Length
2250

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.20b.1 Y47G6A.20b.1 2360   I: 3539553-3546910