WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.23a.1 Sequence Name  Y47G6A.23a.1
Length (nt)  12391   Chromosome Location  I: 3564963-3600731
Chromosome . Primary Identifier  I Chromosome Location . Start  3564963
Chromosome Location . End  3600731 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.23a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003060 lpd-3 Y47G6A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.23a Y47G6A.23a 12057   I: 3565243-3565380

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23a.1 3564963 3600731 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7226   418   I: 3564963-3565380 Caenorhabditis elegans
Exon7230   138   I: 3567297-3567434 Caenorhabditis elegans
Exon7235   453   I: 3568220-3568672 Caenorhabditis elegans
Exon7239   660   I: 3569724-3570383 Caenorhabditis elegans
Exon7243   123   I: 3571156-3571278 Caenorhabditis elegans
Exon7247   693   I: 3571942-3572634 Caenorhabditis elegans
Exon7251   383   I: 3573354-3573736 Caenorhabditis elegans
Exon7255   685   I: 3574537-3575221 Caenorhabditis elegans
Exon7259   1513   I: 3576154-3577666 Caenorhabditis elegans
Exon7263   822   I: 3578714-3579535 Caenorhabditis elegans
Exon7267   96   I: 3580196-3580291 Caenorhabditis elegans
Exon7271   419   I: 3580341-3580759 Caenorhabditis elegans
Exon7275   660   I: 3581847-3582506 Caenorhabditis elegans
Exon7279   112   I: 3583430-3583541 Caenorhabditis elegans
Exon7283   1267   I: 3583595-3584861 Caenorhabditis elegans
Exon7287   313   I: 3585185-3585497 Caenorhabditis elegans
Exon7291   570   I: 3586719-3587288 Caenorhabditis elegans
Exon7295   183   I: 3588103-3588285 Caenorhabditis elegans
Exon7299   252   I: 3589434-3589685 Caenorhabditis elegans
Exon7303   118   I: 3590291-3590408 Caenorhabditis elegans
Exon7307   356   I: 3591006-3591361 Caenorhabditis elegans
Exon7311   120   I: 3592122-3592241 Caenorhabditis elegans
Exon7315   262   I: 3592419-3592680 Caenorhabditis elegans
Exon7319   188   I: 3593645-3593832 Caenorhabditis elegans
Exon7323   339   I: 3594612-3594950 Caenorhabditis elegans
Exon7327   323   I: 3595976-3596298 Caenorhabditis elegans
Exon7331   207   I: 3597300-3597506 Caenorhabditis elegans
Exon7336   137   I: 3598620-3598756 Caenorhabditis elegans
Exon7340   165   I: 3598810-3598974 Caenorhabditis elegans
Exon7344   192   I: 3599765-3599956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23a.1 3564963 3600731 -1

1 Sequence

Length
12391

1 Sequence Ontology Term

Identifier Name Description
transcript