WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06H11.1b.1 Sequence Name  T06H11.1b.1
Length (nt)  1712   Chromosome Location  X: 10105099-10125483
Chromosome . Primary Identifier  X Chromosome Location . Start  10105099
Chromosome Location . End  10125483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06H11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06H11.1b T06H11.1b 1662   X: 10105099-10105205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1b.1 10105099 10125483 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247985   107   X: 10105099-10105205 Caenorhabditis elegans
Exon247988   185   X: 10105343-10105527 Caenorhabditis elegans
Exon247995   91   X: 10105572-10105662 Caenorhabditis elegans
Exon248002   122   X: 10106065-10106186 Caenorhabditis elegans
Exon248009   67   X: 10106232-10106298 Caenorhabditis elegans
Exon248020   121   X: 10106828-10106948 Caenorhabditis elegans
Exon248027   170   X: 10106996-10107165 Caenorhabditis elegans
Exon248034   257   X: 10107214-10107470 Caenorhabditis elegans
Exon248041   131   X: 10107663-10107793 Caenorhabditis elegans
Exon248050   149   X: 10109183-10109331 Caenorhabditis elegans
Exon248067   172   X: 10125019-10125190 Caenorhabditis elegans
Exon248068   140   X: 10125344-10125483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1b.1 10105099 10125483 -1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript