WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014507 Gene Name  T06H11.t1
Sequence Name  ? T06H11.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by Ethanol based on RNA-seq studies. Biotype  SO:0001272
Genetic Position  Length (nt)  ? 82
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014507

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06H11.t1 T06H11.t1 82   X: 10124498-10124579
 

Other

0 CDSs

2 RNAi Result

WormBase ID
WBRNAi00052690
WBRNAi00018322

10 Allele

Public Name
gk964260
gk962707
e2828
gk963793
e2824
e2821
gk695950
gk849172
gk483233
WBVar01786912

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014507 10124498 10124579 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes that are upregulated by 0.2M ethanol treatment. Differences in gene expression levels between the two groups of worms were analyzed with Cufflinks 1.0.3, using a cutoff of twofold difference and FDR corrected p < 0.05. WBPaper00041954:ethanol_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014507 10124498 10124579 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
82

1 Sequence Ontology Term