WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B9.2a.1 Sequence Name  F09B9.2a.1
Length (nt)  3002   Chromosome Location  X: 10146892-10153142
Chromosome . Primary Identifier  X Chromosome Location . Start  10146892
Chromosome Location . End  10153142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006839 unc-115 F09B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B9.2a F09B9.2a 1878   X: 10146990-10146993

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.2a.1 10146892 10153142 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248104   102   X: 10146892-10146993 Caenorhabditis elegans
Exon248106   93   X: 10147538-10147630 Caenorhabditis elegans
Exon248108   249   X: 10148881-10149129 Caenorhabditis elegans
Exon248110   221   X: 10149199-10149419 Caenorhabditis elegans
Exon248112   144   X: 10149750-10149893 Caenorhabditis elegans
Exon248114   229   X: 10150034-10150262 Caenorhabditis elegans
Exon248116   110   X: 10150308-10150417 Caenorhabditis elegans
Exon248119   242   X: 10150719-10150960 Caenorhabditis elegans
Exon248121   98   X: 10151012-10151109 Caenorhabditis elegans
Exon248123   207   X: 10151232-10151438 Caenorhabditis elegans
Exon248125   154   X: 10151784-10151937 Caenorhabditis elegans
Exon248128   1153   X: 10151990-10153142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.2a.1 10146892 10153142 1

1 Sequence

Length
3002

1 Sequence Ontology Term

Identifier Name Description
transcript