WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B9.2b.1 Sequence Name  F09B9.2b.1
Length (nt)  1920   Chromosome Location  X: 10147492-10152116
Chromosome . Primary Identifier  X Chromosome Location . Start  10147492
Chromosome Location . End  10152116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B9.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006839 unc-115 F09B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B9.2b F09B9.2b 1920   X: 10147492-10147630

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.2b.1 10147492 10152116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248127   139   X: 10147492-10147630 Caenorhabditis elegans
Exon248131   249   X: 10148881-10149129 Caenorhabditis elegans
Exon248133   221   X: 10149199-10149419 Caenorhabditis elegans
Exon248135   144   X: 10149750-10149893 Caenorhabditis elegans
Exon248137   229   X: 10150034-10150262 Caenorhabditis elegans
Exon248139   110   X: 10150308-10150417 Caenorhabditis elegans
Exon248142   242   X: 10150719-10150960 Caenorhabditis elegans
Exon248144   98   X: 10151012-10151109 Caenorhabditis elegans
Exon248146   207   X: 10151232-10151438 Caenorhabditis elegans
Exon248148   154   X: 10151784-10151937 Caenorhabditis elegans
Exon248149   127   X: 10151990-10152116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.2b.1 10147492 10152116 1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
transcript