WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07A4.1.1 Sequence Name  C07A4.1.1
Length (nt)  1466   Chromosome Location  X: 10167305-10171693
Chromosome . Primary Identifier  X Chromosome Location . Start  10167305
Chromosome Location . End  10171693 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007396 rnp-9 C07A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07A4.1 C07A4.1 939   X: 10168053-10168151

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07A4.1.1 10167305 10171693 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248150   149   X: 10167305-10167453 Caenorhabditis elegans
Exon248151   108   X: 10168044-10168151 Caenorhabditis elegans
Exon248152   93   X: 10168203-10168295 Caenorhabditis elegans
Exon248153   61   X: 10168440-10168500 Caenorhabditis elegans
Exon248154   88   X: 10168979-10169066 Caenorhabditis elegans
Exon248155   76   X: 10169394-10169469 Caenorhabditis elegans
Exon248156   120   X: 10169548-10169667 Caenorhabditis elegans
Exon248157   67   X: 10169714-10169780 Caenorhabditis elegans
Exon248158   188   X: 10170936-10171123 Caenorhabditis elegans
Exon248159   516   X: 10171178-10171693 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07A4.1.1 10167305 10171693 1

1 Sequence

Length
1466

1 Sequence Ontology Term

Identifier Name Description
transcript