WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21A10.2a.5 Sequence Name  F21A10.2a.5
Length (nt)  3912   Chromosome Location  X: 10180940-10190451
Chromosome . Primary Identifier  X Chromosome Location . Start  10180940
Chromosome Location . End  10190451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21A10.2a.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008999 myrf-2 F21A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21A10.2a F21A10.2a 2697   X: 10181811-10182114

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21A10.2a.5 10180940 10190451 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248199   1175   X: 10180940-10182114 Caenorhabditis elegans
Exon248212   239   X: 10182598-10182836 Caenorhabditis elegans
Exon248223   119   X: 10182886-10183004 Caenorhabditis elegans
Exon248234   859   X: 10183054-10183912 Caenorhabditis elegans
Exon248251   276   X: 10186372-10186647 Caenorhabditis elegans
Exon248262   114   X: 10186696-10186809 Caenorhabditis elegans
Exon248273   375   X: 10186858-10187232 Caenorhabditis elegans
Exon248284   291   X: 10187279-10187569 Caenorhabditis elegans
Exon248295   157   X: 10187678-10187834 Caenorhabditis elegans
Exon248306   73   X: 10187886-10187958 Caenorhabditis elegans
Exon248318   234   X: 10190218-10190451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21A10.2a.5 10180940 10190451 -1

1 Sequence

Length
3912

1 Sequence Ontology Term

Identifier Name Description
transcript