WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21A10.2a.2 Sequence Name  F21A10.2a.2
Length (nt)  3837   Chromosome Location  X: 10180953-10188470
Chromosome . Primary Identifier  X Chromosome Location . Start  10180953
Chromosome Location . End  10188470 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21A10.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008999 myrf-2 F21A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21A10.2a F21A10.2a 2697   X: 10181811-10182114

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21A10.2a.2 10180953 10188470 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248202   1162   X: 10180953-10182114 Caenorhabditis elegans
Exon248209   239   X: 10182598-10182836 Caenorhabditis elegans
Exon248220   119   X: 10182886-10183004 Caenorhabditis elegans
Exon248231   859   X: 10183054-10183912 Caenorhabditis elegans
Exon248248   276   X: 10186372-10186647 Caenorhabditis elegans
Exon248259   114   X: 10186696-10186809 Caenorhabditis elegans
Exon248270   375   X: 10186858-10187232 Caenorhabditis elegans
Exon248281   291   X: 10187279-10187569 Caenorhabditis elegans
Exon248292   157   X: 10187678-10187834 Caenorhabditis elegans
Exon248303   73   X: 10187886-10187958 Caenorhabditis elegans
Exon248315   172   X: 10188299-10188470 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21A10.2a.2 10180953 10188470 -1

1 Sequence

Length
3837

1 Sequence Ontology Term

Identifier Name Description
transcript