WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21A9.2.1 Sequence Name  F21A9.2.1
Length (nt)  1461   Chromosome Location  I: 3706030-3709435
Chromosome . Primary Identifier  I Chromosome Location . Start  3706030
Chromosome Location . End  3709435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017651 F21A9.2 F21A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21A9.2 F21A9.2 1179   I: 3706097-3706154

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21A9.2.1 3706030 3709435 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7542   125   I: 3706030-3706154 Caenorhabditis elegans
Exon7543   155   I: 3706203-3706357 Caenorhabditis elegans
Exon7544   262   I: 3706531-3706792 Caenorhabditis elegans
Exon7545   146   I: 3707682-3707827 Caenorhabditis elegans
Exon7546   188   I: 3707874-3708061 Caenorhabditis elegans
Exon7547   111   I: 3708108-3708218 Caenorhabditis elegans
Exon7548   115   I: 3708377-3708491 Caenorhabditis elegans
Exon7549   102   I: 3708680-3708781 Caenorhabditis elegans
Exon7550   257   I: 3709179-3709435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21A9.2.1 3706030 3709435 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
transcript