WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12F5.3.1 Sequence Name  T12F5.3.1
Length (nt)  3747   Chromosome Location  I: 3727027-3731179
Chromosome . Primary Identifier  I Chromosome Location . Start  3727027
Chromosome Location . End  3731179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12F5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001601 glh-4 T12F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12F5.3 T12F5.3 3471   I: 3727061-3727065

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12F5.3.1 3727027 3731179 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7579   39   I: 3727027-3727065 Caenorhabditis elegans
Exon7580   647   I: 3727114-3727760 Caenorhabditis elegans
Exon7581   1014   I: 3727838-3728851 Caenorhabditis elegans
Exon7582   393   I: 3728898-3729290 Caenorhabditis elegans
Exon7583   303   I: 3729338-3729640 Caenorhabditis elegans
Exon7584   85   I: 3729686-3729770 Caenorhabditis elegans
Exon7585   342   I: 3729817-3730158 Caenorhabditis elegans
Exon7586   304   I: 3730207-3730510 Caenorhabditis elegans
Exon7587   620   I: 3730560-3731179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12F5.3.1 3727027 3731179 1

1 Sequence

Length
3747

1 Sequence Ontology Term

Identifier Name Description
transcript