WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14H10.3a.1 Sequence Name  C14H10.3a.1
Length (nt)  2951   Chromosome Location  X: 10220641-10228137
Chromosome . Primary Identifier  X Chromosome Location . Start  10220641
Chromosome Location . End  10228137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007593 C14H10.3 C14H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14H10.3a C14H10.3a 2409   X: 10221182-10221387

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14H10.3a.1 10220641 10228137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248366   747   X: 10220641-10221387 Caenorhabditis elegans
Exon248368   449   X: 10221637-10222085 Caenorhabditis elegans
Exon248371   172   X: 10222137-10222308 Caenorhabditis elegans
Exon248374   109   X: 10222371-10222479 Caenorhabditis elegans
Exon248377   399   X: 10222533-10222931 Caenorhabditis elegans
Exon248380   291   X: 10222990-10223280 Caenorhabditis elegans
Exon248383   135   X: 10223335-10223469 Caenorhabditis elegans
Exon248386   151   X: 10223519-10223669 Caenorhabditis elegans
Exon248389   156   X: 10223722-10223877 Caenorhabditis elegans
Exon248392   173   X: 10223932-10224104 Caenorhabditis elegans
Exon248395   100   X: 10224241-10224340 Caenorhabditis elegans
Exon248400   69   X: 10228069-10228137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14H10.3a.1 10220641 10228137 -1

1 Sequence

Length
2951

1 Sequence Ontology Term

Identifier Name Description
transcript