WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41E7.1.1 Sequence Name  F41E7.1.1
Length (nt)  1918   Chromosome Location  X: 10279599-10282842
Chromosome . Primary Identifier  X Chromosome Location . Start  10279599
Chromosome Location . End  10282842 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009617 slc-9B.1 F41E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E7.1 F41E7.1 1551   X: 10279633-10279689

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.1.1 10279599 10282842 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248518   91   X: 10279599-10279689 Caenorhabditis elegans
Exon248519   79   X: 10279738-10279816 Caenorhabditis elegans
Exon248520   147   X: 10279864-10280010 Caenorhabditis elegans
Exon248521   161   X: 10280861-10281021 Caenorhabditis elegans
Exon248522   110   X: 10281066-10281175 Caenorhabditis elegans
Exon248523   176   X: 10281257-10281432 Caenorhabditis elegans
Exon248524   362   X: 10281479-10281840 Caenorhabditis elegans
Exon248525   156   X: 10281883-10282038 Caenorhabditis elegans
Exon248526   171   X: 10282153-10282323 Caenorhabditis elegans
Exon248527   465   X: 10282378-10282842 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.1.1 10279599 10282842 1

1 Sequence

Length
1918

1 Sequence Ontology Term

Identifier Name Description
transcript