WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41E7.3.1 Sequence Name  F41E7.3.1
Length (nt)  1580   Chromosome Location  X: 10282819-10285734
Chromosome . Primary Identifier  X Chromosome Location . Start  10282819
Chromosome Location . End  10285734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009619 npr-6 F41E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E7.3 F41E7.3 1209   X: 10283151-10283245

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.3.1 10282819 10285734 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248528   427   X: 10282819-10283245 Caenorhabditis elegans
Exon248529   84   X: 10283403-10283486 Caenorhabditis elegans
Exon248530   74   X: 10283535-10283608 Caenorhabditis elegans
Exon248531   138   X: 10284100-10284237 Caenorhabditis elegans
Exon248532   176   X: 10284285-10284460 Caenorhabditis elegans
Exon248533   177   X: 10284549-10284725 Caenorhabditis elegans
Exon248534   113   X: 10284945-10285057 Caenorhabditis elegans
Exon248535   86   X: 10285115-10285200 Caenorhabditis elegans
Exon248536   95   X: 10285250-10285344 Caenorhabditis elegans
Exon248537   87   X: 10285396-10285482 Caenorhabditis elegans
Exon248538   123   X: 10285612-10285734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.3.1 10282819 10285734 -1

1 Sequence

Length
1580

1 Sequence Ontology Term

Identifier Name Description
transcript