WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E3.6.1 Sequence Name  R07E3.6.1
Length (nt)  3126   Chromosome Location  X: 10317722-10321857
Chromosome . Primary Identifier  X Chromosome Location . Start  10317722
Chromosome Location . End  10321857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011107 R07E3.6 R07E3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E3.6 R07E3.6 2784   X: 10317881-10318047

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.6.1 10317722 10321857 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248586   326   X: 10317722-10318047 Caenorhabditis elegans
Exon248587   361   X: 10318210-10318570 Caenorhabditis elegans
Exon248588   117   X: 10318627-10318743 Caenorhabditis elegans
Exon248589   525   X: 10319182-10319706 Caenorhabditis elegans
Exon248590   121   X: 10319756-10319876 Caenorhabditis elegans
Exon248591   324   X: 10319926-10320249 Caenorhabditis elegans
Exon248592   293   X: 10320296-10320588 Caenorhabditis elegans
Exon248593   150   X: 10320632-10320781 Caenorhabditis elegans
Exon248594   138   X: 10320838-10320975 Caenorhabditis elegans
Exon248595   184   X: 10321023-10321206 Caenorhabditis elegans
Exon248596   587   X: 10321271-10321857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.6.1 10317722 10321857 1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript