WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E3.4.1 Sequence Name  R07E3.4.1
Length (nt)  1095   Chromosome Location  X: 10330547-10331900
Chromosome . Primary Identifier  X Chromosome Location . Start  10330547
Chromosome Location . End  10331900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011105 R07E3.4 R07E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E3.4 R07E3.4 897   X: 10330718-10330826

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.4.1 10330547 10331900 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248613   280   X: 10330547-10330826 Caenorhabditis elegans
Exon248614   258   X: 10330875-10331132 Caenorhabditis elegans
Exon248616   178   X: 10331179-10331356 Caenorhabditis elegans
Exon248618   148   X: 10331405-10331552 Caenorhabditis elegans
Exon248620   78   X: 10331601-10331678 Caenorhabditis elegans
Exon248622   153   X: 10331748-10331900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.4.1 10330547 10331900 -1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript