WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07E3.3b Sequence Name  R07E3.3b
Length (nt)  1140   Chromosome Location  X: 10334014-10334160
Chromosome . Primary Identifier  X Chromosome Location . Start  10334014
Chromosome Location . End  10334160
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E3.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40396 CUT-5, isoform b 43.1 379 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00061283
WBRNAi00051466
WBRNAi00017547
WBRNAi00034705

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07E3.3b 10334014 10334160 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011104 cut-5 R07E3.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07E3.3b 10334014 10334160 -1
CDS:R07E3.3b 10334455 10334540 -1
CDS:R07E3.3b 10334588 10334687 -1
CDS:R07E3.3b 10334812 10334971 -1
CDS:R07E3.3b 10335021 10335136 -1
CDS:R07E3.3b 10335229 10335343 -1
CDS:R07E3.3b 10335438 10335580 -1
CDS:R07E3.3b 10337623 10337781 -1
CDS:R07E3.3b 10337830 10337904 -1
CDS:R07E3.3b 10338151 10338189 -1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07E3.3b.1 R07E3.3b.1 1305   X: 10333860-10338200