WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E3.2.1 Sequence Name  R07E3.2.1
Length (nt)  632   Chromosome Location  X: 10336438-10337168
Chromosome . Primary Identifier  X Chromosome Location . Start  10336438
Chromosome Location . End  10337168 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011103 idpa-3 R07E3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E3.2 R07E3.2 498   X: 10336443-10336521

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.2.1 10336438 10337168 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248640   84   X: 10336438-10336521 Caenorhabditis elegans
Exon248641   135   X: 10336566-10336700 Caenorhabditis elegans
Exon248642   413   X: 10336756-10337168 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E3.2.1 10336438 10337168 1

1 Sequence

Length
632

1 Sequence Ontology Term

Identifier Name Description
transcript