WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49A10A.1.1 Sequence Name  Y49A10A.1.1
Length (nt)  1530   Chromosome Location  X: 10358383-10360550
Chromosome . Primary Identifier  X Chromosome Location . Start  10358383
Chromosome Location . End  10360550 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49A10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013028 efhc-1 Y49A10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49A10A.1 Y49A10A.1 1344   X: 10358494-10358684

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49A10A.1.1 10358383 10360550 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248701   302   X: 10358383-10358684 Caenorhabditis elegans
Exon248702   187   X: 10358915-10359101 Caenorhabditis elegans
Exon248703   144   X: 10359150-10359293 Caenorhabditis elegans
Exon248704   114   X: 10359339-10359452 Caenorhabditis elegans
Exon248705   98   X: 10359496-10359593 Caenorhabditis elegans
Exon248706   110   X: 10359637-10359746 Caenorhabditis elegans
Exon248707   161   X: 10359793-10359953 Caenorhabditis elegans
Exon248708   72   X: 10360044-10360115 Caenorhabditis elegans
Exon248709   146   X: 10360165-10360310 Caenorhabditis elegans
Exon248710   196   X: 10360355-10360550 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49A10A.1.1 10358383 10360550 1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
transcript