WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49A10A.2.2 Sequence Name  Y49A10A.2.2
Length (nt)  1187   Chromosome Location  X: 10370743-10372359
Chromosome . Primary Identifier  X Chromosome Location . Start  10370743
Chromosome Location . End  10372359 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49A10A.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044949 Y49A10A.2 Y49A10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49A10A.2 Y49A10A.2 699   X: 10371224-10371247

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49A10A.2.2 10370743 10372359 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248684   505   X: 10370743-10371247 Caenorhabditis elegans
Exon248687   114   X: 10371297-10371410 Caenorhabditis elegans
Exon248689   312   X: 10371696-10372007 Caenorhabditis elegans
Exon248691   102   X: 10372056-10372157 Caenorhabditis elegans
Exon248693   154   X: 10372206-10372359 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49A10A.2.2 10370743 10372359 -1

1 Sequence

Length
1187

1 Sequence Ontology Term

Identifier Name Description
transcript