WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F6.1b.1 Sequence Name  F46F6.1b.1
Length (nt)  2521   Chromosome Location  X: 10373232-10377769
Chromosome . Primary Identifier  X Chromosome Location . Start  10373232
Chromosome Location . End  10377769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004375 rme-4 F46F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.1b F46F6.1b 1992   X: 10373602-10374007

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.1b.1 10373232 10377769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248696   776   X: 10373232-10374007 Caenorhabditis elegans
Exon248702   173   X: 10374571-10374743 Caenorhabditis elegans
Exon248706   129   X: 10374786-10374914 Caenorhabditis elegans
Exon248710   54   X: 10374962-10375015 Caenorhabditis elegans
Exon248714   96   X: 10375270-10375365 Caenorhabditis elegans
Exon248718   336   X: 10375417-10375752 Caenorhabditis elegans
Exon248722   103   X: 10375798-10375900 Caenorhabditis elegans
Exon248726   230   X: 10376322-10376551 Caenorhabditis elegans
Exon248730   169   X: 10376595-10376763 Caenorhabditis elegans
Exon248734   117   X: 10377204-10377320 Caenorhabditis elegans
Exon248738   159   X: 10377384-10377542 Caenorhabditis elegans
Exon248742   179   X: 10377591-10377769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.1b.1 10373232 10377769 -1

1 Sequence

Length
2521

1 Sequence Ontology Term

Identifier Name Description
transcript