WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F6.4a.1 Sequence Name  F46F6.4a.1
Length (nt)  1707   Chromosome Location  X: 10379693-10386508
Chromosome . Primary Identifier  X Chromosome Location . Start  10379693
Chromosome Location . End  10386508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001122 dyf-6 F46F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.4a F46F6.4a 1416   X: 10379934-10380149

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4a.1 10379693 10386508 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248746   457   X: 10379693-10380149 Caenorhabditis elegans
Exon248750   117   X: 10380196-10380312 Caenorhabditis elegans
Exon248754   192   X: 10380362-10380553 Caenorhabditis elegans
Exon248758   155   X: 10380609-10380763 Caenorhabditis elegans
Exon248763   138   X: 10381244-10381381 Caenorhabditis elegans
Exon248767   90   X: 10381427-10381516 Caenorhabditis elegans
Exon248771   70   X: 10383516-10383585 Caenorhabditis elegans
Exon248776   95   X: 10385554-10385648 Caenorhabditis elegans
Exon248778   196   X: 10385695-10385890 Caenorhabditis elegans
Exon248781   197   X: 10386312-10386508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4a.1 10379693 10386508 -1

1 Sequence

Length
1707

1 Sequence Ontology Term

Identifier Name Description
transcript