WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F6.4d.1 Sequence Name  F46F6.4d.1
Length (nt)  1146   Chromosome Location  X: 10379700-10383585
Chromosome . Primary Identifier  X Chromosome Location . Start  10379700
Chromosome Location . End  10383585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001122 dyf-6 F46F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.4d F46F6.4d 897   X: 10379934-10380149

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4d.1 10379700 10383585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248748   450   X: 10379700-10380149 Caenorhabditis elegans
Exon248753   117   X: 10380196-10380312 Caenorhabditis elegans
Exon248757   192   X: 10380362-10380553 Caenorhabditis elegans
Exon248761   155   X: 10380609-10380763 Caenorhabditis elegans
Exon248762   65   X: 10381244-10381308 Caenorhabditis elegans
Exon248766   7   X: 10381375-10381381 Caenorhabditis elegans
Exon248770   90   X: 10381427-10381516 Caenorhabditis elegans
Exon248774   70   X: 10383516-10383585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4d.1 10379700 10383585 -1

1 Sequence

Length
1146

1 Sequence Ontology Term

Identifier Name Description
transcript