WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F6.4c.2 Sequence Name  F46F6.4c.2
Length (nt)  1555   Chromosome Location  X: 10379709-10385951
Chromosome . Primary Identifier  X Chromosome Location . Start  10379709
Chromosome Location . End  10385951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.4c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001122 dyf-6 F46F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.4c F46F6.4c 963   X: 10379934-10380149

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4c.2 10379709 10385951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248776   441   X: 10379709-10380149 Caenorhabditis elegans
Exon248779   117   X: 10380196-10380312 Caenorhabditis elegans
Exon248783   192   X: 10380362-10380553 Caenorhabditis elegans
Exon248787   155   X: 10380609-10380763 Caenorhabditis elegans
Exon248792   138   X: 10381244-10381381 Caenorhabditis elegans
Exon248796   90   X: 10381427-10381516 Caenorhabditis elegans
Exon248800   70   X: 10383516-10383585 Caenorhabditis elegans
Exon248804   95   X: 10385554-10385648 Caenorhabditis elegans
Exon248807   257   X: 10385695-10385951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F6.4c.2 10379709 10385951 -1

1 Sequence

Length
1555

1 Sequence Ontology Term

Identifier Name Description
transcript