WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F2.7.1 Sequence Name  C50F2.7.1
Length (nt)  640   Chromosome Location  I: 3900407-3901444
Chromosome . Primary Identifier  I Chromosome Location . Start  3900407
Chromosome Location . End  3901444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016840 C50F2.7 C50F2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F2.7 C50F2.7 426   I: 3900508-3900617

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F2.7.1 3900407 3901444 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8027   211   I: 3900407-3900617 Caenorhabditis elegans
Exon8028   259   I: 3900968-3901226 Caenorhabditis elegans
Exon8029   170   I: 3901275-3901444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F2.7.1 3900407 3901444 -1

1 Sequence

Length
640

1 Sequence Ontology Term

Identifier Name Description
transcript