WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46F6.2d Sequence Name  F46F6.2d
Length (nt)  3414   Chromosome Location  X: 10397396-10397874
Chromosome . Primary Identifier  X Chromosome Location . Start  10397396
Chromosome Location . End  10397874
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53155 PKN-1, isoform d 127.3 1137 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00001225
WBRNAi00047564
WBRNAi00015119
WBRNAi00076440
WBRNAi00109810
WBRNAi00032385
WBRNAi00109669
WBRNAi00109763
WBRNAi00109716

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46F6.2d 10397396 10397874 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009793 pkn-1 F46F6.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46F6.2d 10397396 10397874 1
CDS:F46F6.2d 10398133 10398425 1
CDS:F46F6.2d 10398475 10399397 1
CDS:F46F6.2d 10399470 10399689 1
CDS:F46F6.2d 10399741 10399842 1
CDS:F46F6.2d 10400118 10400260 1
CDS:F46F6.2d 10400477 10401248 1
CDS:F46F6.2d 10401300 10401493 1
CDS:F46F6.2d 10401545 10401691 1
CDS:F46F6.2d 10401789 10401929 1

1 Sequence

Length
3414

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46F6.2d.1 F46F6.2d.1 4215   X: 10397242-10402576