WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC504.2.1 Sequence Name  ZC504.2.1
Length (nt)  1810   Chromosome Location  X: 10412725-10416661
Chromosome . Primary Identifier  X Chromosome Location . Start  10412725
Chromosome Location . End  10416661 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC504.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000047 acr-8 ZC504.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC504.2 ZC504.2 1623   X: 10412842-10412878

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC504.2.1 10412725 10416661 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248878   154   X: 10412725-10412878 Caenorhabditis elegans
Exon248880   155   X: 10412929-10413083 Caenorhabditis elegans
Exon248882   155   X: 10413795-10413949 Caenorhabditis elegans
Exon248884   64   X: 10414227-10414290 Caenorhabditis elegans
Exon248886   138   X: 10414583-10414720 Caenorhabditis elegans
Exon248888   89   X: 10414788-10414876 Caenorhabditis elegans
Exon248890   164   X: 10414926-10415089 Caenorhabditis elegans
Exon248892   144   X: 10415289-10415432 Caenorhabditis elegans
Exon248894   79   X: 10415479-10415557 Caenorhabditis elegans
Exon248896   125   X: 10415603-10415727 Caenorhabditis elegans
Exon248898   326   X: 10415787-10416112 Caenorhabditis elegans
Exon248900   217   X: 10416445-10416661 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC504.2.1 10412725 10416661 1

1 Sequence

Length
1810

1 Sequence Ontology Term

Identifier Name Description
transcript