WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B3.4.1 Sequence Name  F47B3.4.1
Length (nt)  965   Chromosome Location  I: 3960968-3962249
Chromosome . Primary Identifier  I Chromosome Location . Start  3960968
Chromosome Location . End  3962249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018528 F47B3.4 F47B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B3.4 F47B3.4 846   I: 3961037-3961060

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B3.4.1 3960968 3962249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8105   93   I: 3960968-3961060 Caenorhabditis elegans
Exon8106   231   I: 3961107-3961337 Caenorhabditis elegans
Exon8107   234   I: 3961384-3961617 Caenorhabditis elegans
Exon8108   407   I: 3961843-3962249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B3.4.1 3960968 3962249 1

1 Sequence

Length
965

1 Sequence Ontology Term

Identifier Name Description
transcript