WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B3.5.1 Sequence Name  F47B3.5.1
Length (nt)  786   Chromosome Location  I: 3963088-3964177
Chromosome . Primary Identifier  I Chromosome Location . Start  3963088
Chromosome Location . End  3964177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018529 F47B3.5 F47B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B3.5 F47B3.5 759   I: 3963115-3963471

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B3.5.1 3963088 3964177 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8109   384   I: 3963088-3963471 Caenorhabditis elegans
Exon8110   234   I: 3963697-3963930 Caenorhabditis elegans
Exon8111   155   I: 3963977-3964131 Caenorhabditis elegans
Exon8112   13   I: 3964165-3964177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B3.5.1 3963088 3964177 -1

1 Sequence

Length
786

1 Sequence Ontology Term

Identifier Name Description
transcript