WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC504.4d.1 Sequence Name  ZC504.4d.1
Length (nt)  3848   Chromosome Location  X: 10421653-10428657
Chromosome . Primary Identifier  X Chromosome Location . Start  10421653
Chromosome Location . End  10428657 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC504.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003247 mig-15 ZC504.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC504.4d ZC504.4d 3219   X: 10422199-10422282

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC504.4d.1 10421653 10428657 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248883   630   X: 10421653-10422282 Caenorhabditis elegans
Exon248890   221   X: 10422521-10422741 Caenorhabditis elegans
Exon248894   79   X: 10422790-10422868 Caenorhabditis elegans
Exon248898   336   X: 10422946-10423281 Caenorhabditis elegans
Exon248902   483   X: 10423329-10423811 Caenorhabditis elegans
Exon248907   111   X: 10424232-10424342 Caenorhabditis elegans
Exon248911   87   X: 10424445-10424531 Caenorhabditis elegans
Exon248915   558   X: 10424841-10425398 Caenorhabditis elegans
Exon248918   121   X: 10425643-10425763 Caenorhabditis elegans
Exon248920   73   X: 10425852-10425924 Caenorhabditis elegans
Exon248924   270   X: 10425970-10426239 Caenorhabditis elegans
Exon248928   144   X: 10426439-10426582 Caenorhabditis elegans
Exon248932   241   X: 10427203-10427443 Caenorhabditis elegans
Exon248936   198   X: 10427491-10427688 Caenorhabditis elegans
Exon248940   168   X: 10427984-10428151 Caenorhabditis elegans
Exon248944   128   X: 10428530-10428657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC504.4d.1 10421653 10428657 -1

1 Sequence

Length
3848

1 Sequence Ontology Term

Identifier Name Description
transcript