WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC504.4c.1 Sequence Name  ZC504.4c.1
Length (nt)  3835   Chromosome Location  X: 10421655-10428574
Chromosome . Primary Identifier  X Chromosome Location . Start  10421655
Chromosome Location . End  10428574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC504.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003247 mig-15 ZC504.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC504.4c ZC504.4c 3291   X: 10422199-10422282

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC504.4c.1 10421655 10428574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248885   628   X: 10421655-10422282 Caenorhabditis elegans
Exon248889   221   X: 10422521-10422741 Caenorhabditis elegans
Exon248893   79   X: 10422790-10422868 Caenorhabditis elegans
Exon248897   336   X: 10422946-10423281 Caenorhabditis elegans
Exon248901   483   X: 10423329-10423811 Caenorhabditis elegans
Exon248903   27   X: 10424122-10424148 Caenorhabditis elegans
Exon248906   111   X: 10424232-10424342 Caenorhabditis elegans
Exon248910   87   X: 10424445-10424531 Caenorhabditis elegans
Exon248914   558   X: 10424841-10425398 Caenorhabditis elegans
Exon248917   121   X: 10425643-10425763 Caenorhabditis elegans
Exon248923   388   X: 10425852-10426239 Caenorhabditis elegans
Exon248927   144   X: 10426439-10426582 Caenorhabditis elegans
Exon248931   241   X: 10427203-10427443 Caenorhabditis elegans
Exon248935   198   X: 10427491-10427688 Caenorhabditis elegans
Exon248939   168   X: 10427984-10428151 Caenorhabditis elegans
Exon248941   45   X: 10428530-10428574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC504.4c.1 10421655 10428574 -1

1 Sequence

Length
3835

1 Sequence Ontology Term

Identifier Name Description
transcript