WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39B10.2e.1 Sequence Name  C39B10.2e.1
Length (nt)  1701   Chromosome Location  X: 10454266-10460424
Chromosome . Primary Identifier  X Chromosome Location . Start  10454266
Chromosome Location . End  10460424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39B10.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008022 lgc-41 C39B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39B10.2e C39B10.2e 1575   X: 10454309-10454358

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.2e.1 10454266 10460424 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248961   93   X: 10454266-10454358 Caenorhabditis elegans
Exon248973   160   X: 10454553-10454712 Caenorhabditis elegans
Exon248983   110   X: 10454759-10454868 Caenorhabditis elegans
Exon248993   147   X: 10454929-10455075 Caenorhabditis elegans
Exon249003   47   X: 10455121-10455167 Caenorhabditis elegans
Exon249013   162   X: 10455215-10455376 Caenorhabditis elegans
Exon249023   129   X: 10456230-10456358 Caenorhabditis elegans
Exon249033   56   X: 10456401-10456456 Caenorhabditis elegans
Exon249043   67   X: 10456532-10456598 Caenorhabditis elegans
Exon249053   123   X: 10456654-10456776 Caenorhabditis elegans
Exon249064   69   X: 10457110-10457178 Caenorhabditis elegans
Exon249073   120   X: 10457945-10458064 Caenorhabditis elegans
Exon249081   75   X: 10458116-10458190 Caenorhabditis elegans
Exon249093   122   X: 10458243-10458364 Caenorhabditis elegans
Exon249102   221   X: 10460204-10460424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.2e.1 10454266 10460424 1

1 Sequence

Length
1701

1 Sequence Ontology Term

Identifier Name Description
transcript