WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39B10.2c.1 Sequence Name  C39B10.2c.1
Length (nt)  1776   Chromosome Location  X: 10454308-10460502
Chromosome . Primary Identifier  X Chromosome Location . Start  10454308
Chromosome Location . End  10460502 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39B10.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008022 lgc-41 C39B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39B10.2c C39B10.2c 1614   X: 10454309-10454358

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.2c.1 10454308 10460502 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248963   51   X: 10454308-10454358 Caenorhabditis elegans
Exon248971   160   X: 10454553-10454712 Caenorhabditis elegans
Exon248981   110   X: 10454759-10454868 Caenorhabditis elegans
Exon248991   147   X: 10454929-10455075 Caenorhabditis elegans
Exon249001   47   X: 10455121-10455167 Caenorhabditis elegans
Exon249011   162   X: 10455215-10455376 Caenorhabditis elegans
Exon249021   129   X: 10456230-10456358 Caenorhabditis elegans
Exon249031   56   X: 10456401-10456456 Caenorhabditis elegans
Exon249041   67   X: 10456532-10456598 Caenorhabditis elegans
Exon249051   123   X: 10456654-10456776 Caenorhabditis elegans
Exon249061   117   X: 10457062-10457178 Caenorhabditis elegans
Exon249071   120   X: 10457945-10458064 Caenorhabditis elegans
Exon249085   66   X: 10458125-10458190 Caenorhabditis elegans
Exon249091   122   X: 10458243-10458364 Caenorhabditis elegans
Exon249107   299   X: 10460204-10460502 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.2c.1 10454308 10460502 1

1 Sequence

Length
1776

1 Sequence Ontology Term

Identifier Name Description
transcript