WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39B10.1.1 Sequence Name  C39B10.1.1
Length (nt)  2051   Chromosome Location  X: 10460473-10463642
Chromosome . Primary Identifier  X Chromosome Location . Start  10460473
Chromosome Location . End  10463642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39B10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008021 C39B10.1 C39B10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39B10.1 C39B10.1 1752   X: 10460710-10460874

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.1.1 10460473 10463642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249109   402   X: 10460473-10460874 Caenorhabditis elegans
Exon249110   417   X: 10460932-10461348 Caenorhabditis elegans
Exon249111   132   X: 10461421-10461552 Caenorhabditis elegans
Exon249112   118   X: 10461964-10462081 Caenorhabditis elegans
Exon249113   86   X: 10462131-10462216 Caenorhabditis elegans
Exon249114   158   X: 10462266-10462423 Caenorhabditis elegans
Exon249115   106   X: 10462469-10462574 Caenorhabditis elegans
Exon249116   275   X: 10462657-10462931 Caenorhabditis elegans
Exon249117   91   X: 10463018-10463108 Caenorhabditis elegans
Exon249118   76   X: 10463168-10463243 Caenorhabditis elegans
Exon249119   190   X: 10463453-10463642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39B10.1.1 10460473 10463642 -1

1 Sequence

Length
2051

1 Sequence Ontology Term

Identifier Name Description
transcript