WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F3.1c.1 Sequence Name  F14F3.1c.1
Length (nt)  1824   Chromosome Location  X: 10516003-10519579
Chromosome . Primary Identifier  X Chromosome Location . Start  10516003
Chromosome Location . End  10519579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006870 vab-3 F14F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F3.1c F14F3.1c 891   X: 10516008-10516110

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1c.1 10516003 10519579 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249190   108   X: 10516003-10516110 Caenorhabditis elegans
Exon249194   123   X: 10516371-10516493 Caenorhabditis elegans
Exon249198   83   X: 10516560-10516642 Caenorhabditis elegans
Exon249202   278   X: 10517424-10517701 Caenorhabditis elegans
Exon249206   170   X: 10517840-10518009 Caenorhabditis elegans
Exon249209   1062   X: 10518518-10519579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1c.1 10516003 10519579 1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
transcript