WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F3.2.1 Sequence Name  F14F3.2.1
Length (nt)  2324   Chromosome Location  X: 10524898-10528452
Chromosome . Primary Identifier  X Chromosome Location . Start  10524898
Chromosome Location . End  10528452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008805 git-1 F14F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F3.2 F14F3.2 2013   X: 10524918-10524942

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.2.1 10524898 10528452 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249224   45   X: 10524898-10524942 Caenorhabditis elegans
Exon249225   120   X: 10524989-10525108 Caenorhabditis elegans
Exon249226   82   X: 10525256-10525337 Caenorhabditis elegans
Exon249227   72   X: 10525393-10525464 Caenorhabditis elegans
Exon249228   153   X: 10525521-10525673 Caenorhabditis elegans
Exon249229   184   X: 10525742-10525925 Caenorhabditis elegans
Exon249230   306   X: 10525972-10526277 Caenorhabditis elegans
Exon249231   197   X: 10526322-10526518 Caenorhabditis elegans
Exon249232   201   X: 10526562-10526762 Caenorhabditis elegans
Exon249233   183   X: 10526812-10526994 Caenorhabditis elegans
Exon249234   179   X: 10527267-10527445 Caenorhabditis elegans
Exon249235   116   X: 10527494-10527609 Caenorhabditis elegans
Exon249236   87   X: 10527659-10527745 Caenorhabditis elegans
Exon249238   399   X: 10528054-10528452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.2.1 10524898 10528452 1

1 Sequence

Length
2324

1 Sequence Ontology Term

Identifier Name Description
transcript