WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F5.5.1 Sequence Name  F59F5.5.1
Length (nt)  1395   Chromosome Location  X: 10546016-10549132
Chromosome . Primary Identifier  X Chromosome Location . Start  10546016
Chromosome Location . End  10549132 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010344 F59F5.5 F59F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F5.5 F59F5.5 1215   X: 10546026-10546127

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.5.1 10546016 10549132 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249297   112   X: 10546016-10546127 Caenorhabditis elegans
Exon249298   111   X: 10546177-10546287 Caenorhabditis elegans
Exon249299   111   X: 10546340-10546450 Caenorhabditis elegans
Exon249301   141   X: 10547266-10547406 Caenorhabditis elegans
Exon249302   86   X: 10547453-10547538 Caenorhabditis elegans
Exon249303   94   X: 10547614-10547707 Caenorhabditis elegans
Exon249304   98   X: 10547756-10547853 Caenorhabditis elegans
Exon249305   169   X: 10547911-10548079 Caenorhabditis elegans
Exon249306   156   X: 10548304-10548459 Caenorhabditis elegans
Exon249307   317   X: 10548816-10549132 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.5.1 10546016 10549132 1

1 Sequence

Length
1395

1 Sequence Ontology Term

Identifier Name Description
transcript