WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C7.1d.1 Sequence Name  F57C7.1d.1
Length (nt)  4130   Chromosome Location  X: 10569273-10575719
Chromosome . Primary Identifier  X Chromosome Location . Start  10569273
Chromosome Location . End  10575719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010199 bet-2 F57C7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C7.1d F57C7.1d 3630   X: 10569273-10570058

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C7.1d.1 10569273 10575719 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249374   786   X: 10569273-10570058 Caenorhabditis elegans
Exon249380   267   X: 10570106-10570372 Caenorhabditis elegans
Exon249386   120   X: 10571865-10571984 Caenorhabditis elegans
Exon249390   708   X: 10572083-10572790 Caenorhabditis elegans
Exon249394   503   X: 10572841-10573343 Caenorhabditis elegans
Exon249398   485   X: 10573398-10573882 Caenorhabditis elegans
Exon249400   390   X: 10573930-10574319 Caenorhabditis elegans
Exon249404   272   X: 10574792-10575063 Caenorhabditis elegans
Exon249405   599   X: 10575121-10575719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C7.1d.1 10569273 10575719 1

1 Sequence

Length
4130

1 Sequence Ontology Term

Identifier Name Description
transcript