WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C7.1c.1 Sequence Name  F57C7.1c.1
Length (nt)  3583   Chromosome Location  X: 10569273-10574643
Chromosome . Primary Identifier  X Chromosome Location . Start  10569273
Chromosome Location . End  10574643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010199 bet-2 F57C7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C7.1c F57C7.1c 3264   X: 10569273-10570058

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C7.1c.1 10569273 10574643 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249376   786   X: 10569273-10570058 Caenorhabditis elegans
Exon249379   267   X: 10570106-10570372 Caenorhabditis elegans
Exon249384   120   X: 10571708-10571827 Caenorhabditis elegans
Exon249389   708   X: 10572083-10572790 Caenorhabditis elegans
Exon249393   503   X: 10572841-10573343 Caenorhabditis elegans
Exon249397   485   X: 10573398-10573882 Caenorhabditis elegans
Exon249401   714   X: 10573930-10574643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C7.1c.1 10569273 10574643 1

1 Sequence

Length
3583

1 Sequence Ontology Term

Identifier Name Description
transcript